BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028G02SP1|AL428953
(878 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1800 1719 0.0
>3x_Contig1800
Length = 38778
Score = 1719 bits (867), Expect = 0.0
Identities = 877/879 (99%), Gaps = 1/879 (0%)
Strand = Plus / Plus
Query: 1 gatcacatgaccatatattacatattcttggcctgccccaccttttcagcttcttcgaag 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31888 gatcacatgaccataaattacatattcttggcctgccccaccttttcagcttcttcgaag 31947
Query: 61 actttgtagtattttcactgagtaatcagggtgtccacaatttttcagttcctcgagtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31948 actttgtagtattttcactgagtaatcagggtgtccacaatttttcagttcctcgagtgg 32007
Query: 121 ttggactccggcgaa-caacttagtgcagcgatgctcttcggaaatcgtgagatgcgtgt 179
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32008 ttggactccggcgaagcaacttagtgcagcgatgctcttcggaaatcgtgagatgcgtgt 32067
Query: 180 ttagaaacacactctattaccattttgaagagacattgaaagacattgactttttcaagc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32068 ttagaaacacactctattaccattttgaagagacattgaaagacattgactttttcaagc 32127
Query: 240 cataggagacttaaggtaaaggctaagtttaaagtgtgaacattacaattgaagcgagca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32128 cataggagacttaaggtaaaggctaagtttaaagtgtgaacattacaattgaagcgagca 32187
Query: 300 ttggcttaagaaggacatctatgaagtgtggcatgggatggctttcaacttaagtggatc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32188 ttggcttaagaaggacatctatgaagtgtggcatgggatggctttcaacttaagtggatc 32247
Query: 360 aatagttatataaatgtatgaggtgattaactctagatgtgggaaccaattgataagtaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32248 aatagttatataaatgtatgaggtgattaactctagatgtgggaaccaattgataagtaa 32307
Query: 420 tattattcaattgattaatgatatatcccaaagaagtgcataagtcactccgtcaggaaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32308 tattattcaattgattaatgatatatcccaaagaagtgcataagtcactccgtcaggaaa 32367
Query: 480 acttatactcacaacaatatgacacaagagaagaagaaacaacaatctgtcgcaattatc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32368 acttatactcacaacaatatgacacaagagaagaagaaacaacaatctgtcgcaattatc 32427
Query: 540 ggtgctggggcagccggtttaactgctctttttgaacttctacacaccaagaaagatggc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32428 ggtgctggggcagccggtttaactgctctttttgaacttctacacaccaagaaagatggc 32487
Query: 600 tctaccagcttgaagtacaatgcagacgggtctttcgattcggccaactctgtaaatgac 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32488 tctaccagcttgaagtacaatgcagacgggtctttcgattcggccaactctgtaaatgac 32547
Query: 660 gatccagccttcggcgaaattgtactattcgaacaggccggaaaagtcggtggtgtttgg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32548 gatccagccttcggcgaaattgtactattcgaacaggccggaaaagtcggtggtgtttgg 32607
Query: 720 aaccccagcttcgacactccagatttcattcctcaagatatattcgacactgaacgttac 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32608 aaccccagcttcgacactccagatttcattcctcaagatatattcgacactgaacgttac 32667
Query: 780 gatgatccctctgttttgcgtccaaagaccgaagttcctgcagaattcactggccaatct 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32668 gatgatccctctgttttgcgtccaaagaccgaagttcctgcagaattcactggccaatct 32727
Query: 840 tttgaacagccattggagaaaactattgatagtaccacg 878
|||||||||||||||||||||||||||||||||||||||
Sbjct: 32728 tttgaacagccattggagaaaactattgatagtaccacg 32766
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6313
Number of Sequences: 1807
Number of extensions: 6313
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 878
length of database: 10,358,551
effective HSP length: 16
effective length of query: 862
effective length of database: 10,329,639
effective search space: 8904148818
effective search space used: 8904148818
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)